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Brody-Lab

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  1. findr findr Public

    FINDR: Flow-field Inference from Neural Data using deep Recurrent networks

    Jupyter Notebook 25 2

  2. chronic_neuropixels chronic_neuropixels Public

    Repository of code, data and CAD files associated with Luo*, Bondy* et al (2020). "An approach for long-term, multi-probe Neuropixels recordings in unrestrained rats"

    MATLAB 12 5

  3. MixtureAgentsModels MixtureAgentsModels Public

    Julia 9 3

  4. decision_dynamics_commitment decision_dynamics_commitment Public

    Code and data accompanying: Luo*, Kim*, et al. (2025). Transitions in dynamical regime and neural mode underlie perceptual decision-making. PMID: 37904994

    MATLAB 8

  5. PulseInputDDM.jl PulseInputDDM.jl Public

    A Julia library for fitting DDMs to pulse-based evidence accumulations task data

    Julia 6 2

  6. FHMDDM FHMDDM Public

    Factorial hidden Markov drift-diffusion model

    Julia 4

Repositories

Showing 10 of 47 repositories
  • Breda-Charlton-FixationGrower Public

    Repository for the production of figures for the 2026 eLife submission of Jess Breda and Julie Charlton's Fixation Grower publication

    Brody-Lab/Breda-Charlton-FixationGrower's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 9, 2026
  • findr Public

    FINDR: Flow-field Inference from Neural Data using deep Recurrent networks

    Brody-Lab/findr's past year of commit activity
    Jupyter Notebook 25 Apache-2.0 2 0 0 Updated Jul 9, 2026
  • bondy_charlton_luo_2026 Public

    Code and figures for Bondy, Charlton, Luo et al. (2026).

    Brody-Lab/bondy_charlton_luo_2026's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jul 4, 2026
  • mouse_npx_holders Public

    3D files for chronic neuropixel holders modified by Jesse Kaminsky and Jorge Yanar from holders in Luo, Bondy et al. 2020.

    Brody-Lab/mouse_npx_holders's past year of commit activity
    1 GPL-3.0 0 0 0 Updated May 28, 2026
  • jbreda_animal_training Public

    Repository for the ingestion, cleaning and visualization of behavioral experiments

    Brody-Lab/jbreda_animal_training's past year of commit activity
    Jupyter Notebook 2 0 39 0 Updated May 13, 2026
  • Bpod_Public Public

    Bpod firmware, hardware, and software for public sharing

    Brody-Lab/Bpod_Public's past year of commit activity
    MATLAB 0 0 0 0 Updated May 9, 2026
  • ExperPort_public Public

    public facing ExperPort code

    Brody-Lab/ExperPort_public's past year of commit activity
    MATLAB 0 0 0 0 Updated May 9, 2026
  • FHMDDM Public

    Factorial hidden Markov drift-diffusion model

    Brody-Lab/FHMDDM's past year of commit activity
    Julia 4 Apache-2.0 0 0 0 Updated Mar 11, 2026
  • decision_dynamics_commitment Public

    Code and data accompanying: Luo*, Kim*, et al. (2025). Transitions in dynamical regime and neural mode underlie perceptual decision-making. PMID: 37904994

    Brody-Lab/decision_dynamics_commitment's past year of commit activity
    MATLAB 8 Apache-2.0 0 0 0 Updated Feb 16, 2026
  • fof_ads_interactions Public
    Brody-Lab/fof_ads_interactions's past year of commit activity
    Python 0 0 0 0 Updated Dec 1, 2025
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