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Lieber Institute for Brain Development

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  1. spatialLIBD spatialLIBD Public

    Code for the spatialLIBD R/Bioconductor package and shiny app

    R 115 24

  2. HumanPilot HumanPilot Public

    Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

    HTML 97 29

  3. recount3 recount3 Public

    Explore and download data from the recount3 project

    R 42 5

  4. spatialDLPFC spatialDLPFC Public

    spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

    HTML 36 6

  5. 10xPilot_snRNAseq-human 10xPilot_snRNAseq-human Public

    10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC

    HTML 29 10

  6. dotdotdot dotdotdot Public

    Example vignette for dotdotdot software

    MATLAB 19 11

Repositories

Showing 10 of 141 repositories
  • spatialDLPFC_SCZ Public

    Visium-IF/RNAscope-IF project looking at spatial gene expression in the context of perineuronal nets in DLPFC of neurotypical control donors and donors with a diagnosis of schizophrenia

    LieberInstitute/spatialDLPFC_SCZ's past year of commit activity
    HTML 1 0 17 0 Updated Oct 14, 2026
  • spatialDLPFC_mdd_bpd Public

    spatialDLPFC_mdd_bpd

    LieberInstitute/spatialDLPFC_mdd_bpd's past year of commit activity
    HTML 0 0 0 0 Updated Oct 14, 2026
  • slurmjobs Public

    Helper functions for working with SLURM from R

    LieberInstitute/slurmjobs's past year of commit activity
    R 2 1 1 0 Updated Oct 14, 2026
  • spatialLIBD Public

    Code for the spatialLIBD R/Bioconductor package and shiny app

    LieberInstitute/spatialLIBD's past year of commit activity
    R 115 Artistic-2.0 24 25 2 Updated Oct 13, 2026
  • LieberInstitute.github.io Public

    public website for LIBD content

    LieberInstitute/LieberInstitute.github.io's past year of commit activity
    HTML 0 0 0 0 Updated Oct 13, 2026
  • globus Public

    LIBD Globus Share Endpoints

    LieberInstitute/globus's past year of commit activity
    HTML 0 1 0 0 Updated Oct 13, 2026
  • LFF_spatial_ERC Public

    LFF_spatial_ERC

    LieberInstitute/LFF_spatial_ERC's past year of commit activity
    HTML 2 MIT 0 2 0 Updated Oct 9, 2026
  • Hb_multiome Public

    Human Habenula Multiome Project

    LieberInstitute/Hb_multiome's past year of commit activity
    HTML 0 MIT 0 6 0 Updated Oct 9, 2026
  • LieberInstitute/Habenula_Visium's past year of commit activity
    HTML 0 MIT 0 3 0 Updated Oct 7, 2026
  • Posit_Connect_shiny_apps Public

    Code for Posit Connect R shiny apps (spatialLIBD, iSEE, ...)

    LieberInstitute/Posit_Connect_shiny_apps's past year of commit activity
    HTML 0 0 0 0 Updated Oct 6, 2026